1）Shengjuan Shao, Rilei Yu, Yanqing Yu,Yanni Li*, Dual-inhibitors of STAT5 and STAT3: studies from molecular docking and molecular dynamics simulations, Journal of Molecular Modeling, 20(8): 2399-2415, 2014.

2）于延庆，于志超，乔建军，李艳妮*，分子伴侣HdeA与HdeB作用机制的研究进展与展望，中国生物化学与分子生物学报，30(5) : 441-446, 2014.

3）Guiying Zhang, Kun Wang, Baohua Zheng, Maosheng Cheng, Yanni Li*, Keliang Liu* and Lifeng Cai*, Exchangeability of amino acid residues with similar physicochemical properties in coiled-coil interactions, Chemical Communications, 49(94):11086-11088，2013.

4）邵圣娟，李艳妮*, 靶向抗癌药伊马替尼耐药性的研究进展,中国新药杂志，7,12-20，2013

5）王昆，郑保华，蔡利锋，刘克良，李艳妮*, HIV-1gp41 NHR 序列靶点专一性的荧光共振能转移测定, 军事医学, 37(1), 47-52, 2013

6）孟戎茜, 李奎, 黄文灿, 李艳妮*, α7-nAChR 和α9α10-nAChR的同源模建研究,计算机与应用化学，30(3), 261-266,2013.

7）Caijuan Shi, Rilei Yu, Shengjuan Shao, Yanni Li*, Partial activation ofα7 nicotinic acetylcholine receptors:insights from molecular dynamics simulations. Journal of Molecular Modeling,19(2),871-878,2013.

8）Yu Wang, Yige Wang, Pengpeng Cao, Yanni Li and Huanrong Li, Rectangular-plate like organosilica microcrystals based on silylatedβ-diketone and lanthanide ions, CrystEngComm, 13, 177-181, 2011.

9）Yanxia Ding, Yige Wang, Yanni Li, Pengpeng Cao and Tiezhen Ren, The sensitized emission of Eu3+ and Tb3+ by 4-fluorobenzophenone confined in zeolite L microcrystals, Photochemical & Photobiological Sciences, 10, 543-547, 2011

10）李奎，孟戎茜，李艳妮，多巴胺D1和D5 受体的同源模建研究，计算机与应用化学，27(9),1211-1215,2010.

11）Shengai Sun, Rilei Yu, Yanhui Zhang, Yanni Li, Molecular dynamic simulation on the conformation of mouse muscle type nAChR, Frontiers of chemical engineering in China, 4(3),348-352, 2010.

12）Yige Wang, Huanrong Li, Lijian Gu, Quanying Gan, Yanni Li, Gion Calzaferri，Thermally stable luminescent lanthanide complexes in zeolite L, Microporous and Mesoporous Materials, 121, 1-6, 2009.

13）梁娜娜，李艳妮，葛志强，基于QSAR/QSSR的苯并三唑化合物选择性抑制PTP-1B的研究，化学学报，67(8), 735-745, 2009.

14）于倩，李艳妮，葛志强，1,2-萘醌类化合物抑制PTP1B的三维定量构效关系研究，化学学报, 66(2),188-194,2008

15）张伟，李婕，李艳妮*，Discodermolide及其衍生物三维定量构效关系的研究，化学学报，66(20)，2209-2218，2008

16）Yuan, Wei, LUAN, Lin-Bo, LI, Yan-Ni*, CoMFA 3D-QSAR Analysis of Epothilones Based on Docking Conformation and Alignment，Chinese J. Chemistry, 25(4)，453-460，2007

17）王振兴，李艳妮，孙艳华，乔建军*，新烟碱类化合物药效构象的分子对接研究，化学学报，65(17)，1881-1886，2007

18）李金涛，李艳妮，元英进*,HIV蛋白酶抑制剂—利迪链菌素的分子对接研究，化学学报，64(24)，2491-2495，2006

19）那平，张帆，李艳妮，水化Na-蒙脱石和Na/Mg-蒙脱石的分子动力学模拟，物理化学学报，22(9)，1137-1142，2006